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Screening for proteins differentially expressed between nasopharyngeal carcinoma xenografts sensitive or resistant to 10 Gy X-irradiation using a combination of iTRAQand OrbiTrap MS/MS
MA Hui,LU Xiao-di,QU Song,ZHAO Wei,LI Lin, GUO Ya,HUANG Yuan-jiao,FU Qiang,CEN Wei-jian,WANG Jin-zi,ZHU Xiao-dong
2014, 6 (4):
336-341.
doi: 10.3969/j.issn.1674-5671.2014.04.04
Objective To detect proteins differentially expressed between radiosensitive and radioresistant nasopharyngeal carcinoma xenografts exposed to 10 Gy X-irradiation in an effort to identify proteins related to radiotherapy resistance.Methods Xenograft tumors of radiosensitive CNE-2 cells or radioresistant CNE-2R cells were established in nude mice. Proteins were extracted,digested into peptides,and labeled using the iTRAQ kit. Peptide mixtures were separated by 2D-HPLC,then analyzed by LTQ-Orbitrap massspectrometry. Differentially expressed proteins were classified according to gene ontology analysis. Results A total of 61 differentially expressed proteins were identified,of which 17 were up-regulated and 44 were down-regulated. GO analysis showed these proteins to
be involved in key biological processes such as cell cycle regulation,catabolism,signaling pathway regulation,response to pressure tress and redox reactions. Conclusion MudPIT analysis identified the following 7 proteins that may help render nasopharyngeal tumor issue radioresistant: Annexin2,PDIA3,Ubiquitin,CKAP4,HSPA8,14-3-3δ/ζ,and NLRC4.
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